Workflows
What is a Workflow?Filters
ChIP-seq peak-calling and differential analysis pipeline.
Type: Nextflow
Creators: Philip Ewels, Espinosa-Carrasco J, Patel H, Wang C, Ewels P
Submitter: WorkflowHub Bot
An automated processing pipeline for mammalian bulk calling cards experiments
Workflow converts one or multiple bam files back to the fastq format
CAGE-seq pipeline
Type: Nextflow
Creators: Kevin Menden, Tristan Kast, Matthias Hörtenhuber
Submitter: WorkflowHub Bot
A mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences
Simple bacterial assembly and annotation pipeline.
ATACSeq peak-calling and differential analysis pipeline.
Type: Nextflow
Creators: Harshil Patel, Patel H, Langer B, Espinosa-Carrasco J, Syme R
Submitter: WorkflowHub Bot
RNA sequencing analysis pipeline for gene/isoform quantification and extensive quality control.
Pre-processing of mass spectrometry-based metabolomics data
Importing single-end multiplexed data (not demultiplexed yet)
Type: Galaxy
Creators: Debjyoti Ghosh, Helmholtz-Zentrum für Umweltforschung - UFZ
Submitter: WorkflowHub Bot